PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rsa1.0_00344.1_g00006.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus
Family bZIP
Protein Properties Length: 428aa    MW: 47146.4 Da    PI: 9.6895
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rsa1.0_00344.1_g00006.1genomeRGDView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_146.48.4e-15350401555
                              CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH.HHHHHHH CS
                   bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke.leelkke 55 
                              +r++r++kNRe+A rsR+RK+a++ eLe +v++L+++N++L+ + +e ++k+
  Rsa1.0_00344.1_g00006.1 350 RRQKRMIKNRESAARSRARKQAYTLELEAEVAQLKEQNEELQRKqVEIMEKQ 401
                              69*************************************9975404434444 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003385.4E-14346411IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.921348393IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1706.2E-14350405No hitNo description
CDDcd147077.74E-26350404No hitNo description
SuperFamilySSF579591.5E-10350401No hitNo description
PfamPF001701.1E-12350406IPR004827Basic-leucine zipper domain
PROSITE patternPS000360353368IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 428 aa     Download sequence    Send to blast
MGSRFNFVDE AKHPALGAGV PLMRQNSVFS LTFDEFQSSW GGGIGKDFGS MNMDELLKNI  60
WTAEESHSMM ANNNNTSFNN TVVMNNNGGF SVGVGGELAG CGGGLQRQGS LTLPRTISQK  120
RVDDVWKELM KEDDSGDGVG NVGGGASGVP QRQQTLGEMT LEEFLVRAGV VREESQPVER  180
VDNFNGGFFG FGSDAGLVSA RNGFGGPNQP HGGVVRPDLL TTQTQPLQMQ QQQPQKVHQP  240
RELIPKQDVA FPKQTTIAFS NTVDLVNRSQ PLTQEVKPTI LGVRDRPMNN NLLQAVDFKT  300
GVTVAAVSPG SQMSPDLTPK SAMDASLSPV PYMFGRVRKT GAVLEKVIER RQKRMIKNRE  360
SAARSRARKQ AYTLELEAEV AQLKEQNEEL QRKQVEIMEK QKKQLLEPMR QAWGCKRQCL  420
RRTLTGPW
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3534080.0AK353408.1 Thellungiella halophila mRNA, complete cds, clone: RTFL01-30-J01.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006412286.10.0hypothetical protein EUTSA_v10025203mg
SwissprotQ9M7Q30.0AI5L6_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 6
TrEMBLE4MY110.0E4MY11_EUTHA; mRNA, clone: RTFL01-30-J01
TrEMBLV4MBG20.0V4MBG2_EUTSA; Uncharacterized protein
STRINGAT4G34000.10.0(Arabidopsis thaliana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM73427129
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34000.20.0abscisic acid responsive elements-binding factor 3